Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 AC069152.1-201ENST00000438030 544 ntBASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 AC133552.2-202ENST00000575694 574 ntBASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 AC008687.6-201ENST00000596318 630 ntBASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGB1Q9Y5G3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 AL121906.2-201ENST00000621597 723 ntBASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 AC084018.2-201ENST00000613093 2607 ntBASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGB1Q9Y5G3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 AC133041.1-202ENST00000642053 222 ntBASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 AC108860.2-201ENST00000562760 2183 ntBASIC17.04■□□□□ 0.32
PCDHGB1Q9Y5G3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 AC093677.2-201ENST00000600169 1863 ntBASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms