Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF11Q9Y3C5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 UBE2SP1-201ENST00000450587 669 ntBASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 AP000692.2-201ENST00000608391 879 ntBASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF11Q9Y3C5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 AC139713.2-201ENST00000641328 2723 ntBASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 RPS2P55-201ENST00000397318 883 ntBASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 AC107956.1-201ENST00000494359 873 ntBASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF11Q9Y3C5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RNF11Q9Y3C5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF11Q9Y3C5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.14■□□□□ 0.5
RNF11Q9Y3C5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF11Q9Y3C5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF11Q9Y3C5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms