Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DUX4Q9UBX2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.34■□□□□ 0.21
DUX4Q9UBX2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 TREX1-205ENST00000625293 1783 ntBASIC16.33■□□□□ 0.21
DUX4Q9UBX2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DUX4Q9UBX2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 AC133681.1-201ENST00000465482 601 ntBASIC16.33■□□□□ 0.2
DUX4Q9UBX2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DUX4Q9UBX2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 YBX1P10-201ENST00000444752 975 ntBASIC16.32■□□□□ 0.2
DUX4Q9UBX2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms