Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 AC007613.1-201ENST00000572811 2597 ntBASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC6Q9UBN7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 HBZP1-201ENST00000354915 429 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 AL023284.2-201ENST00000405850 579 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 RASA4DP-201ENST00000460726 1199 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 AC092597.1-201ENST00000487352 616 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
HDAC6Q9UBN7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDAC6Q9UBN7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.02■□□□□ 0.95
HDAC6Q9UBN7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.02■□□□□ 0.95
HDAC6Q9UBN7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.01■□□□□ 0.95
HDAC6Q9UBN7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 AL450487.1-201ENST00000426799 995 ntBASIC21■□□□□ 0.95
HDAC6Q9UBN7 AC024243.1-201ENST00000609234 778 ntBASIC21■□□□□ 0.95
HDAC6Q9UBN7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 AC036111.1-201ENST00000533973 1582 ntBASIC21■□□□□ 0.95
HDAC6Q9UBN7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 AC026471.1-201ENST00000564629 3026 ntBASIC21■□□□□ 0.95
HDAC6Q9UBN7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC6Q9UBN7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HDAC6Q9UBN7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC6Q9UBN7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms