Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.66■■□□□ 1.22
HMG20BQ9P0W2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMG20BQ9P0W2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
HMG20BQ9P0W2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 AC104390.1-201ENST00000555663 520 ntBASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 MIR3917-201ENST00000580971 93 ntBASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 AL357033.4-201ENST00000617703 1807 ntBASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMG20BQ9P0W2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
HMG20BQ9P0W2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 AC116407.4-201ENST00000623319 1061 ntBASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 AC083906.6-201ENST00000641366 219 ntBASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 AL020996.1-203ENST00000536896 2307 ntBASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 KRT8P7-201ENST00000533003 1432 ntBASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 AC034236.2-201ENST00000606662 1610 ntBASIC22.64■■□□□ 1.21
HMG20BQ9P0W2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.63■■□□□ 1.21
HMG20BQ9P0W2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 AL138781.2-201ENST00000617896 1843 ntBASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 UPK3BP1-201ENST00000428678 509 ntBASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 VENTXP5-201ENST00000523979 775 ntBASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.62■■□□□ 1.21
HMG20BQ9P0W2 AC010240.3-201ENST00000607688 395 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms