Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 MIR564-202ENST00000385049 94 ntBASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 WWOX-216ENST00000569818 525 ntBASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CUEDC1Q9NWM3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 AC009947.2-201ENST00000444014 672 ntBASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 AC104076.2-201ENST00000448912 469 ntBASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 LINC01238-205ENST00000567549 1107 ntBASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CUEDC1Q9NWM3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CUEDC1Q9NWM3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 TPM4P1-201ENST00000436100 807 ntBASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms