Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 FAM197Y1-201ENST00000421178 764 ntBASIC17.36■□□□□ 0.37
RLIMQ9NVW2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 AL158047.1-201ENST00000445918 881 ntBASIC17.36■□□□□ 0.37
RLIMQ9NVW2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 AC026271.3-201ENST00000571884 352 ntBASIC17.36■□□□□ 0.37
RLIMQ9NVW2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RLIMQ9NVW2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AL499627.1-201ENST00000569373 2188 ntBASIC17.35■□□□□ 0.37
RLIMQ9NVW2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RLIMQ9NVW2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 B3GAT3P1-201ENST00000471720 806 ntBASIC17.34■□□□□ 0.37
RLIMQ9NVW2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.34■□□□□ 0.37
RLIMQ9NVW2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RLIMQ9NVW2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms