Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR718-201ENST00000390190 70 ntBASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 AP001412.1-201ENST00000608405 714 ntBASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LIN7CQ9NUP9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 NOC2LP2-201ENST00000407594 1944 ntBASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AC012618.2-201ENST00000428058 849 ntBASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AP002982.1-201ENST00000492365 877 ntBASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AL160286.2-201ENST00000567150 934 ntBASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 AL353708.3-201ENST00000610272 989 ntBASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIN7CQ9NUP9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 TSPY23P-201ENST00000440136 739 ntBASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.48■□□□□ 0.07
LIN7CQ9NUP9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LIN7CQ9NUP9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms