Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.81■□□□□ 0.92
VTA1Q9NP79 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VTA1Q9NP79 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTA1Q9NP79 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VTA1Q9NP79 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 IGHV3-47-201ENST00000425060 335 ntBASIC20.8■□□□□ 0.92
VTA1Q9NP79 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 VENTXP7-201ENST00000475503 772 ntBASIC20.8■□□□□ 0.92
VTA1Q9NP79 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 AC138894.3-201ENST00000603787 634 ntBASIC20.8■□□□□ 0.92
VTA1Q9NP79 AL031008.1-201ENST00000619963 541 ntBASIC20.8■□□□□ 0.92
VTA1Q9NP79 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.8■□□□□ 0.92
VTA1Q9NP79 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.8■□□□□ 0.92
VTA1Q9NP79 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
VTA1Q9NP79 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 AL163051.1-201ENST00000569214 1512 ntBASIC20.79■□□□□ 0.92
VTA1Q9NP79 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 AC099336.1-202ENST00000602961 463 ntBASIC20.79■□□□□ 0.92
VTA1Q9NP79 AC104692.2-201ENST00000603054 253 ntBASIC20.79■□□□□ 0.92
VTA1Q9NP79 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VTA1Q9NP79 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.79■□□□□ 0.92
VTA1Q9NP79 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AL160237.2-201ENST00000556165 472 ntBASIC20.78■□□□□ 0.92
VTA1Q9NP79 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
VTA1Q9NP79 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 AC093484.2-201ENST00000580996 2166 ntBASIC20.78■□□□□ 0.92
VTA1Q9NP79 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VTA1Q9NP79 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTA1Q9NP79 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTA1Q9NP79 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTA1Q9NP79 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VTA1Q9NP79 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.77■□□□□ 0.92
VTA1Q9NP79 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms