Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 AL023284.2-201ENST00000405850 579 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 LIN28AP1-201ENST00000429574 405 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 AL137013.1-201ENST00000432946 1228 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 AL512604.3-201ENST00000569583 964 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 MIR4674-201ENST00000582457 87 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 KRT8P32-201ENST00000512863 1461 ntBASIC15.9■□□□□ 0.14
GCM1Q9NP62 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.9■□□□□ 0.14
GCM1Q9NP62 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GCM1Q9NP62 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 AL020996.1-203ENST00000536896 2307 ntBASIC15.89■□□□□ 0.13
GCM1Q9NP62 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 TERF1P1-201ENST00000311003 1181 ntBASIC15.89■□□□□ 0.13
GCM1Q9NP62 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 AC005521.1-201ENST00000393351 872 ntBASIC15.89■□□□□ 0.13
GCM1Q9NP62 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 ATP5G1P1-201ENST00000448724 379 ntBASIC15.89■□□□□ 0.13
GCM1Q9NP62 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GCM1Q9NP62 RCC2P3-201ENST00000418112 1537 ntBASIC15.89■□□□□ 0.13
GCM1Q9NP62 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.89■□□□□ 0.13
GCM1Q9NP62 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 MCCD1P1-208ENST00000445732 328 ntBASIC15.88■□□□□ 0.13
GCM1Q9NP62 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 AC010203.1-204ENST00000548782 407 ntBASIC15.88■□□□□ 0.13
GCM1Q9NP62 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.88■□□□□ 0.13
GCM1Q9NP62 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
GCM1Q9NP62 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms