Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 MIR4758-201ENST00000577688 71 ntBASIC20.8■□□□□ 0.92
CBX8Q9HC52 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 AL645608.8-201ENST00000606034 2086 ntBASIC20.8■□□□□ 0.92
CBX8Q9HC52 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CBX8Q9HC52 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.8■□□□□ 0.92
CBX8Q9HC52 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 KRT8P3-201ENST00000519669 1449 ntBASIC20.79■□□□□ 0.92
CBX8Q9HC52 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CBX8Q9HC52 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.79■□□□□ 0.92
CBX8Q9HC52 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 AC012317.2-201ENST00000623305 2251 ntBASIC20.78■□□□□ 0.92
CBX8Q9HC52 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 NBPF21P-201ENST00000425093 1451 ntBASIC20.78■□□□□ 0.92
CBX8Q9HC52 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 AC098934.4-201ENST00000564127 592 ntBASIC20.78■□□□□ 0.92
CBX8Q9HC52 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 PCDHA12-202ENST00000613593 2588 ntBASIC20.78■□□□□ 0.92
CBX8Q9HC52 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CBX8Q9HC52 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CBX8Q9HC52 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CBX8Q9HC52 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.77■□□□□ 0.92
CBX8Q9HC52 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CBX8Q9HC52 SLC29A4P1-201ENST00000398760 971 ntBASIC20.77■□□□□ 0.92
CBX8Q9HC52 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.77■□□□□ 0.92
CBX8Q9HC52 TSPY6P-201ENST00000448518 926 ntBASIC20.77■□□□□ 0.92
CBX8Q9HC52 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CBX8Q9HC52 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.77■□□□□ 0.92
CBX8Q9HC52 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CBX8Q9HC52 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CBX8Q9HC52 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.77■□□□□ 0.92
CBX8Q9HC52 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CBX8Q9HC52 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.77■□□□□ 0.91
CBX8Q9HC52 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CBX8Q9HC52 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CBX8Q9HC52 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.77■□□□□ 0.91
CBX8Q9HC52 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CBX8Q9HC52 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CBX8Q9HC52 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.76■□□□□ 0.91
CBX8Q9HC52 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CBX8Q9HC52 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CBX8Q9HC52 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CBX8Q9HC52 AC080080.1-201ENST00000625121 2420 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms