Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS2Q99743 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NPAS2Q99743 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPAS2Q99743 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.23■□□□□ 0.51
NPAS2Q99743 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS2Q99743 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS2Q99743 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS2Q99743 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS2Q99743 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPAS2Q99743 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPAS2Q99743 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS2Q99743 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 AP006587.1-201ENST00000534129 1502 ntBASIC18.23■□□□□ 0.51
NPAS2Q99743 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS2Q99743 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS2Q99743 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS2Q99743 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS2Q99743 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.22■□□□□ 0.51
NPAS2Q99743 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS2Q99743 KRT17P2-201ENST00000300992 1314 ntBASIC18.22■□□□□ 0.51
NPAS2Q99743 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.22■□□□□ 0.51
NPAS2Q99743 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS2Q99743 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS2Q99743 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS2Q99743 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.51
NPAS2Q99743 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS2Q99743 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.21■□□□□ 0.51
NPAS2Q99743 AL355075.4-201ENST00000554988 638 ntBASIC18.21■□□□□ 0.51
NPAS2Q99743 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 MIR4785-201ENST00000585005 73 ntBASIC18.21■□□□□ 0.51
NPAS2Q99743 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 CD177P1-201ENST00000606252 935 ntBASIC18.21■□□□□ 0.51
NPAS2Q99743 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS2Q99743 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
NPAS2Q99743 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPAS2Q99743 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS2Q99743 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NPAS2Q99743 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NPAS2Q99743 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS2Q99743 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 YBX1P10-201ENST00000444752 975 ntBASIC18.2■□□□□ 0.5
NPAS2Q99743 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS2Q99743 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 BX088651.1-201ENST00000540551 451 ntBASIC18.2■□□□□ 0.5
NPAS2Q99743 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS2Q99743 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NPAS2Q99743 AC073912.3-201ENST00000624414 853 ntBASIC18.2■□□□□ 0.5
NPAS2Q99743 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms