Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNX27Q96L92 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNX27Q96L92 HCG4P8-203ENST00000443049 980 ntBASIC20.08■□□□□ 0.81
SNX27Q96L92 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.08■□□□□ 0.81
SNX27Q96L92 MIR3180-4-201ENST00000582223 153 ntBASIC20.08■□□□□ 0.81
SNX27Q96L92 AC116407.4-201ENST00000623319 1061 ntBASIC20.08■□□□□ 0.81
SNX27Q96L92 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.08■□□□□ 0.8
SNX27Q96L92 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX27Q96L92 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SNX27Q96L92 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.08■□□□□ 0.8
SNX27Q96L92 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SNX27Q96L92 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNX27Q96L92 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX27Q96L92 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.07■□□□□ 0.8
SNX27Q96L92 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNX27Q96L92 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX27Q96L92 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNX27Q96L92 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNX27Q96L92 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
SNX27Q96L92 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNX27Q96L92 HLA-F-220ENST00000434407 884 ntBASIC20.07■□□□□ 0.8
SNX27Q96L92 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.07■□□□□ 0.8
SNX27Q96L92 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX27Q96L92 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX27Q96L92 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SNX27Q96L92 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX27Q96L92 AL136038.4-201ENST00000603606 1261 ntBASIC20.07■□□□□ 0.8
SNX27Q96L92 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX27Q96L92 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.07■□□□□ 0.8
SNX27Q96L92 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.07■□□□□ 0.8
SNX27Q96L92 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SNX27Q96L92 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX27Q96L92 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.06■□□□□ 0.8
SNX27Q96L92 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNX27Q96L92 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNX27Q96L92 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.06■□□□□ 0.8
SNX27Q96L92 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX27Q96L92 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 AC093458.2-201ENST00000623150 629 ntBASIC20.06■□□□□ 0.8
SNX27Q96L92 AL391807.1-203ENST00000604392 2365 ntBASIC20.06■□□□□ 0.8
SNX27Q96L92 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX27Q96L92 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX27Q96L92 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX27Q96L92 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNX27Q96L92 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SNX27Q96L92 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX27Q96L92 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX27Q96L92 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.05■□□□□ 0.8
SNX27Q96L92 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.05■□□□□ 0.8
SNX27Q96L92 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX27Q96L92 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX27Q96L92 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 AL645929.1-201ENST00000420084 975 ntBASIC20.04■□□□□ 0.8
SNX27Q96L92 AC244107.1-201ENST00000442033 332 ntBASIC20.04■□□□□ 0.8
SNX27Q96L92 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX27Q96L92 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX27Q96L92 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms