Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL390955.1-201ENST00000428694 934 ntBASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 AC007663.1-201ENST00000438948 1240 ntBASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 EGLN1P1-201ENST00000531623 762 ntBASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 CR769767.2-201ENST00000622735 460 ntBASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.18■□□□□ 0.5
PDLIM5Q96HC4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDLIM5Q96HC4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDLIM5Q96HC4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDLIM5Q96HC4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms