Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 B3GAT3P1-201ENST00000471720 806 ntBASIC18.99■□□□□ 0.63
CCDC97Q96F63 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 AC131212.4-201ENST00000623606 975 ntBASIC18.99■□□□□ 0.63
CCDC97Q96F63 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC97Q96F63 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC97Q96F63 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC97Q96F63 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC97Q96F63 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC97Q96F63 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC97Q96F63 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.98■□□□□ 0.63
CCDC97Q96F63 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 AL137013.1-201ENST00000432946 1228 ntBASIC18.98■□□□□ 0.63
CCDC97Q96F63 TSPY23P-201ENST00000440136 739 ntBASIC18.98■□□□□ 0.63
CCDC97Q96F63 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 REXO1L10P-201ENST00000615707 1290 ntBASIC18.98■□□□□ 0.63
CCDC97Q96F63 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 FP475955.4-201ENST00000623131 1990 ntBASIC18.98■□□□□ 0.63
CCDC97Q96F63 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC97Q96F63 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC97Q96F63 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 AC098818.2-201ENST00000564925 2320 ntBASIC18.97■□□□□ 0.63
CCDC97Q96F63 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
CCDC97Q96F63 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CCDC97Q96F63 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC97Q96F63 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 IRX1P1-201ENST00000438849 1838 ntBASIC18.96■□□□□ 0.63
CCDC97Q96F63 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC97Q96F63 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC97Q96F63 MIR1238-201ENST00000408483 83 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms