Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 CRYGFP-201ENST00000418459 633 ntBASIC19.69■□□□□ 0.74
TRIM11Q96F44 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM11Q96F44 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM11Q96F44 GPAT2P1-201ENST00000444924 1672 ntBASIC19.68■□□□□ 0.74
TRIM11Q96F44 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 MIR718-201ENST00000390190 70 ntBASIC19.68■□□□□ 0.74
TRIM11Q96F44 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRIM11Q96F44 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM11Q96F44 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 AC034236.2-201ENST00000606662 1610 ntBASIC19.67■□□□□ 0.74
TRIM11Q96F44 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM11Q96F44 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM11Q96F44 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms