Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.17■□□□□ 0.34
CNOT9Q92600 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNOT9Q92600 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
CNOT9Q92600 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT9Q92600 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.16■□□□□ 0.34
CNOT9Q92600 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT9Q92600 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CNOT9Q92600 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT9Q92600 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CNOT9Q92600 AL023284.2-201ENST00000405850 579 ntBASIC17.16■□□□□ 0.34
CNOT9Q92600 SNORA78-201ENST00000459373 127 ntBASIC17.16■□□□□ 0.34
CNOT9Q92600 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.16■□□□□ 0.34
CNOT9Q92600 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.16■□□□□ 0.34
CNOT9Q92600 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 AP006294.2-201ENST00000641667 209 ntBASIC17.16■□□□□ 0.34
CNOT9Q92600 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNOT9Q92600 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT9Q92600 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 AC008556.1-201ENST00000610908 2040 ntBASIC17.16■□□□□ 0.34
CNOT9Q92600 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT9Q92600 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT9Q92600 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNOT9Q92600 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.15■□□□□ 0.34
CNOT9Q92600 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CNOT9Q92600 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.15■□□□□ 0.34
CNOT9Q92600 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 MIR4785-201ENST00000585005 73 ntBASIC17.15■□□□□ 0.34
CNOT9Q92600 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CNOT9Q92600 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 GPAT2P1-201ENST00000444924 1672 ntBASIC17.15■□□□□ 0.34
CNOT9Q92600 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNOT9Q92600 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNOT9Q92600 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.15■□□□□ 0.34
CNOT9Q92600 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNOT9Q92600 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CNOT9Q92600 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CNOT9Q92600 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.14■□□□□ 0.34
CNOT9Q92600 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
CNOT9Q92600 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 AL109659.2-201ENST00000606809 1674 ntBASIC17.14■□□□□ 0.33
CNOT9Q92600 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 AC079598.2-202ENST00000546624 1451 ntBASIC17.14■□□□□ 0.33
CNOT9Q92600 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms