Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 Z99916.2-201ENST00000604037 246 ntBASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 NBPF21P-201ENST00000425093 1451 ntBASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40AQ8WXH6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 FZD10-202ENST00000539839 3282 ntBASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB40AQ8WXH6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 KRT8P8-201ENST00000434750 1448 ntBASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 AL596275.1-201ENST00000423464 877 ntBASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 AC012618.2-201ENST00000428058 849 ntBASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 AP001412.1-201ENST00000608405 714 ntBASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB40AQ8WXH6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 RPS2P55-201ENST00000397318 883 ntBASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 KRT16P5-201ENST00000455284 522 ntBASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 AC107956.1-201ENST00000494359 873 ntBASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 RARRES2P10-201ENST00000564312 460 ntBASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40AQ8WXH6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms