Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 AC134043.2-201ENST00000624206 2238 ntBASIC18.69■□□□□ 0.58
SLC44A1Q8WWI5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MYLKP1-201ENST00000509077 1580 ntBASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 NIFKP9-201ENST00000419265 221 ntBASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 GNAS-203ENST00000306120 1878 ntBASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC44A1Q8WWI5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 KRT18P41-201ENST00000518924 1277 ntBASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 LINC00896-202ENST00000609602 2128 ntBASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC44A1Q8WWI5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC44A1Q8WWI5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC44A1Q8WWI5 AC133681.1-201ENST00000465482 601 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms