Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 AL512625.2-201ENST00000417533 625 ntBASIC17.09■□□□□ 0.33
SETD9Q8NE22 RPS2P52-201ENST00000469610 820 ntBASIC17.09■□□□□ 0.33
SETD9Q8NE22 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 AC005181.1-201ENST00000604782 1256 ntBASIC17.09■□□□□ 0.33
SETD9Q8NE22 AC005837.3-201ENST00000612163 286 ntBASIC17.09■□□□□ 0.33
SETD9Q8NE22 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.09■□□□□ 0.33
SETD9Q8NE22 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SETD9Q8NE22 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SETD9Q8NE22 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SETD9Q8NE22 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SETD9Q8NE22 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SETD9Q8NE22 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SETD9Q8NE22 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SETD9Q8NE22 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SETD9Q8NE22 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.33
SETD9Q8NE22 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SETD9Q8NE22 AL645608.8-201ENST00000606034 2086 ntBASIC17.08■□□□□ 0.33
SETD9Q8NE22 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.08■□□□□ 0.33
SETD9Q8NE22 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 RCC2P6-201ENST00000526625 1557 ntBASIC17.08■□□□□ 0.32
SETD9Q8NE22 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 TSPY23P-201ENST00000440136 739 ntBASIC17.08■□□□□ 0.32
SETD9Q8NE22 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 NTF6G-201ENST00000591094 616 ntBASIC17.08■□□□□ 0.32
SETD9Q8NE22 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SETD9Q8NE22 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SETD9Q8NE22 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.07■□□□□ 0.32
SETD9Q8NE22 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 REXO1L9P-201ENST00000604264 2108 ntBASIC17.07■□□□□ 0.32
SETD9Q8NE22 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
SETD9Q8NE22 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 AC124283.5-201ENST00000624661 1809 ntBASIC17.07■□□□□ 0.32
SETD9Q8NE22 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SETD9Q8NE22 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms