Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 LINC01023-201ENST00000606054 436 ntBASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 AL023284.2-201ENST00000405850 579 ntBASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 AP003041.3-201ENST00000527151 707 ntBASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 AC010331.1-201ENST00000611423 582 ntBASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.52■□□□□ 0.4
SIMC1Q8NDZ2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
SIMC1Q8NDZ2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIMC1Q8NDZ2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SIMC1Q8NDZ2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIMC1Q8NDZ2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIMC1Q8NDZ2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 WIZP1-201ENST00000531444 2299 ntBASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 AL357033.4-201ENST00000617703 1807 ntBASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 AL138781.2-201ENST00000617896 1843 ntBASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.51■□□□□ 0.39
SIMC1Q8NDZ2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 AC092338.2-201ENST00000568827 1415 ntBASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 AC087499.1-201ENST00000418141 1075 ntBASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 CA15P1-201ENST00000481698 905 ntBASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms