Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 AC093525.10-201ENST00000625130 1569 ntBASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC38A9Q8NBW4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 TSPY22P-201ENST00000427496 604 ntBASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 PVRIG2P-201ENST00000435460 978 ntBASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 KRT8P26-201ENST00000534154 1276 ntBASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 AC092329.2-201ENST00000598402 547 ntBASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC38A9Q8NBW4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC38A9Q8NBW4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC38A9Q8NBW4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SLC38A9Q8NBW4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 AL450487.1-201ENST00000426799 995 ntBASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC38A9Q8NBW4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 KRT8P50-201ENST00000562022 1438 ntBASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC38A9Q8NBW4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms