Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 AC079598.2-202ENST00000546624 1451 ntBASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 AL023284.2-201ENST00000405850 579 ntBASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 MCCD1P1-208ENST00000445732 328 ntBASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TTC9CQ8N5M4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 TSPY17P-201ENST00000450329 467 ntBASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 AP000525.1-201ENST00000608286 694 ntBASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TTC9CQ8N5M4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TTC9CQ8N5M4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AC008556.1-201ENST00000610908 2040 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 KRT8P45-201ENST00000414328 1447 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 CCR12P-201ENST00000446203 998 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AL355075.4-201ENST00000554988 638 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AL353719.1-201ENST00000566847 864 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AC090164.3-201ENST00000610780 2143 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AL023803.3-201ENST00000615559 522 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 GPAT2P1-201ENST00000444924 1672 ntBASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TTC9CQ8N5M4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms