Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 AL022342.1-201ENST00000400363 863 ntBASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 AC079781.3-201ENST00000449110 356 ntBASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 AP002469.2-201ENST00000531724 424 ntBASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPOQ8N3V7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SYNPOQ8N3V7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.89■□□□□ 0.62
SYNPOQ8N3V7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SYNPOQ8N3V7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.89■□□□□ 0.62
SYNPOQ8N3V7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 AC116562.4-201ENST00000641316 2276 ntBASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 MIR564-202ENST00000385049 94 ntBASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 AC074051.2-201ENST00000565115 352 ntBASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 AL121912.1-201ENST00000603683 238 ntBASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 GPALPP1-207ENST00000611650 899 ntBASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPOQ8N3V7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 GPR32P1-201ENST00000601788 811 ntBASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AC233702.3-201ENST00000578656 1387 ntBASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AC008556.1-201ENST00000610908 2040 ntBASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SYNPOQ8N3V7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 GUSBP12-201ENST00000513727 720 ntBASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 SLC25A6P4-201ENST00000586535 553 ntBASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 AL353801.3-201ENST00000609898 542 ntBASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SYNPOQ8N3V7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPOQ8N3V7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms