Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UBE2SP1-201ENST00000450587 669 ntBASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 RPS2P55-201ENST00000397318 883 ntBASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 AC107956.1-201ENST00000494359 873 ntBASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 SLC25A1P4-201ENST00000567977 778 ntBASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 AP000692.2-201ENST00000608391 879 ntBASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 BICD1-207ENST00000551848 1962 ntBASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00346Q8IVM7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 AC073592.3-201ENST00000625118 1834 ntBASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 NUDT16P1-203ENST00000513809 620 ntBASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 AC113410.3-201ENST00000623366 203 ntBASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00346Q8IVM7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 ABHD17AP1-201ENST00000358206 933 ntBASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms