Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CROCCP3Q8IVE0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP3Q8IVE0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CROCCP3Q8IVE0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CROCCP3Q8IVE0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP3Q8IVE0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CROCCP3Q8IVE0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 MIR939-201ENST00000401314 82 ntBASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CROCCP3Q8IVE0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 PBX2P1-201ENST00000493219 1291 ntBASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 AC138028.4-201ENST00000564984 1845 ntBASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 AP001094.4-201ENST00000579008 2176 ntBASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CROCCP3Q8IVE0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CROCCP3Q8IVE0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms