Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 AC008556.1-201ENST00000610908 2040 ntBASIC16.18■□□□□ 0.18
LRRTM1Q86UE6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 KRT8P11-201ENST00000409686 1436 ntBASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 KRT8P3-201ENST00000519669 1449 ntBASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRTM1Q86UE6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 AC098934.4-201ENST00000564127 592 ntBASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRTM1Q86UE6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 PRKY-204ENST00000533551 1019 ntBASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms