Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 IRX1P1-201ENST00000438849 1838 ntBASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 LINC00265-3P-201ENST00000447588 903 ntBASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AC104819.1-201ENST00000504587 486 ntBASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAI1Q7Z5J4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 NUS1P1-201ENST00000446295 882 ntBASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 AC009078.2-202ENST00000463353 338 ntBASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 AC034236.2-201ENST00000606662 1610 ntBASIC15.85■□□□□ 0.13
RAI1Q7Z5J4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 MTMR9LP-203ENST00000426597 1545 ntBASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 AP000347.1-202ENST00000435868 847 ntBASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.84■□□□□ 0.13
RAI1Q7Z5J4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 Z83836.1-201ENST00000624605 1642 ntBASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.83■□□□□ 0.13
RAI1Q7Z5J4 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.83■□□□□ 0.12
RAI1Q7Z5J4 AC006333.2-201ENST00000607957 2099 ntBASIC15.83■□□□□ 0.12
RAI1Q7Z5J4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI1Q7Z5J4 KRT89P-201ENST00000620027 1478 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms