Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 RNF152P1-201ENST00000397754 604 ntBASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 AC008556.1-201ENST00000610908 2040 ntBASIC19.39■□□□□ 0.69
RFWD3Q6PCD5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 LTB4R2-202ENST00000528054 3092 ntBASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 ARMC10P1-201ENST00000313754 855 ntBASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 TSPY5P-201ENST00000426936 936 ntBASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 AC063952.2-201ENST00000498792 1227 ntBASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.38■□□□□ 0.69
RFWD3Q6PCD5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 AC120498.9-201ENST00000339021 3867 ntBASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 AC022616.7-201ENST00000525383 220 ntBASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 MIR3180-5-201ENST00000583743 153 ntBASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.37■□□□□ 0.69
RFWD3Q6PCD5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 KRT8P32-201ENST00000512863 1461 ntBASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFWD3Q6PCD5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms