Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 AC024243.1-201ENST00000609234 778 ntBASIC16.79■□□□□ 0.28
RTL6Q6ICC9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL6Q6ICC9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 HBZP1-201ENST00000354915 429 ntBASIC16.78■□□□□ 0.28
RTL6Q6ICC9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 MCCD1P1-208ENST00000445732 328 ntBASIC16.78■□□□□ 0.28
RTL6Q6ICC9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL6Q6ICC9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 AC120498.9-201ENST00000339021 3867 ntBASIC16.77■□□□□ 0.28
RTL6Q6ICC9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 MIR3180-5-201ENST00000583743 153 ntBASIC16.77■□□□□ 0.28
RTL6Q6ICC9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 AC069148.1-201ENST00000608741 768 ntBASIC16.77■□□□□ 0.28
RTL6Q6ICC9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.77■□□□□ 0.28
RTL6Q6ICC9 TEX21P-204ENST00000641479 1693 ntBASIC16.77■□□□□ 0.28
RTL6Q6ICC9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTL6Q6ICC9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTL6Q6ICC9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTL6Q6ICC9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTL6Q6ICC9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms