Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF43Q68DV7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RNF43Q68DV7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF43Q68DV7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF43Q68DV7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RNF43Q68DV7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.52■□□□□ 0.71
RNF43Q68DV7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.51■□□□□ 0.71
RNF43Q68DV7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 AP000550.4-202ENST00000639755 178 ntBASIC19.51■□□□□ 0.71
RNF43Q68DV7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF43Q68DV7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF43Q68DV7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 AL031133.1-201ENST00000406807 723 ntBASIC19.5■□□□□ 0.71
RNF43Q68DV7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 AC117947.1-201ENST00000427448 529 ntBASIC19.5■□□□□ 0.71
RNF43Q68DV7 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.5■□□□□ 0.71
RNF43Q68DV7 AC009947.2-201ENST00000444014 672 ntBASIC19.5■□□□□ 0.71
RNF43Q68DV7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 MIR4674-201ENST00000582457 87 ntBASIC19.5■□□□□ 0.71
RNF43Q68DV7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF43Q68DV7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF43Q68DV7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 FAM8A6P-201ENST00000407496 1135 ntBASIC19.49■□□□□ 0.71
RNF43Q68DV7 AC026396.1-201ENST00000419388 421 ntBASIC19.49■□□□□ 0.71
RNF43Q68DV7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 AL512604.3-201ENST00000569583 964 ntBASIC19.49■□□□□ 0.71
RNF43Q68DV7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 MYC-208ENST00000641036 567 ntBASIC19.49■□□□□ 0.71
RNF43Q68DV7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF43Q68DV7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF43Q68DV7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF43Q68DV7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms