Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 AC008687.5-201ENST00000593746 558 ntBASIC26.33■■□□□ 1.81
RPGRIP1LQ68CZ1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1LQ68CZ1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
RPGRIP1LQ68CZ1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC26.33■■□□□ 1.8
RPGRIP1LQ68CZ1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1LQ68CZ1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 AC093484.2-201ENST00000580996 2166 ntBASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 BNIP3P18-201ENST00000593976 575 ntBASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1LQ68CZ1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1LQ68CZ1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 AF238378.1-201ENST00000526806 358 ntBASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1LQ68CZ1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 AL022342.1-201ENST00000400363 863 ntBASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 NUS1P2-201ENST00000417358 873 ntBASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 HLA-A-201ENST00000376802 1334 ntBASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1LQ68CZ1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 MINOS1P3-201ENST00000457048 203 ntBASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RPGRIP1LQ68CZ1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms