Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 AC002347.1-201ENST00000569543 541 ntBASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNAPC4Q5SXM2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNAPC4Q5SXM2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 ANKRD20A8P-203ENST00000641373 517 ntBASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 LINC01521-201ENST00000504184 1943 ntBASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 AC099778.1-201ENST00000568593 1911 ntBASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SNAPC4Q5SXM2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AC009533.2-201ENST00000543664 586 ntBASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AL138831.2-201ENST00000606564 490 ntBASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AP005117.1-201ENST00000584346 1413 ntBASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AL357033.4-201ENST00000617703 1807 ntBASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 RNA5SP416-201ENST00000516838 111 ntBASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SNAPC4Q5SXM2 KRT8P50-201ENST00000562022 1438 ntBASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 Z82202.1-201ENST00000623446 1880 ntBASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.3■■■□□ 2.44
SNAPC4Q5SXM2 TCF3P1-201ENST00000423021 1937 ntBASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 UNC93B6-202ENST00000528242 690 ntBASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SNAPC4Q5SXM2 AP002414.3-201ENST00000589352 1468 ntBASIC30.28■■■□□ 2.44
SNAPC4Q5SXM2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SNAPC4Q5SXM2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SNAPC4Q5SXM2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms