Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
RNFT1Q5M7Z0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 KRT8P50-201ENST00000562022 1438 ntBASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 AC026396.1-201ENST00000419388 421 ntBASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 PRELID1P1-202ENST00000567272 903 ntBASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNFT1Q5M7Z0 AC138932.1-201ENST00000534164 6830 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 TPM4P1-201ENST00000436100 807 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 AP003733.1-201ENST00000491725 852 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 UNC93B7-201ENST00000509439 705 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 TPSP2-201ENST00000561760 610 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 AL390719.2-201ENST00000606993 987 ntBASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNFT1Q5M7Z0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNFT1Q5M7Z0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 AC005332.7-201ENST00000614046 2005 ntBASIC16.71■□□□□ 0.27
RNFT1Q5M7Z0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms