Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 AC097493.4-201ENST00000641197 219 ntBASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 HOXB1-202ENST00000577092 1414 ntBASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN20Q4JDL3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 AC009947.2-201ENST00000444014 672 ntBASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN20Q4JDL3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 AP000593.1-201ENST00000393668 712 ntBASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 KRT18P23-201ENST00000435622 1283 ntBASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 AC099343.3-201ENST00000605834 2503 ntBASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN20Q4JDL3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 ECEL1P3-201ENST00000427961 737 ntBASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPN20Q4JDL3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms