Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.36■■□□□ 1.01
USH1GQ495M9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.36■■□□□ 1.01
USH1GQ495M9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
USH1GQ495M9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
USH1GQ495M9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.36■■□□□ 1.01
USH1GQ495M9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.35■■□□□ 1.01
USH1GQ495M9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.35■■□□□ 1.01
USH1GQ495M9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.35■■□□□ 1.01
USH1GQ495M9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
USH1GQ495M9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.35■■□□□ 1.01
USH1GQ495M9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.35■■□□□ 1.01
USH1GQ495M9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.35■■□□□ 1.01
USH1GQ495M9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
USH1GQ495M9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.35■■□□□ 1.01
USH1GQ495M9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.35■■□□□ 1.01
USH1GQ495M9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.35■■□□□ 1.01
USH1GQ495M9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.35■■□□□ 1.01
USH1GQ495M9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USH1GQ495M9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
USH1GQ495M9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.34■■□□□ 1.01
USH1GQ495M9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.34■■□□□ 1.01
USH1GQ495M9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.34■■□□□ 1.01
USH1GQ495M9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.34■■□□□ 1.01
USH1GQ495M9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 AC069148.1-201ENST00000608741 768 ntBASIC21.34■■□□□ 1.01
USH1GQ495M9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
USH1GQ495M9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.34■■□□□ 1.01
USH1GQ495M9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USH1GQ495M9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
USH1GQ495M9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
USH1GQ495M9 HLA-F-220ENST00000434407 884 ntBASIC21.33■■□□□ 1.01
USH1GQ495M9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.33■■□□□ 1.01
USH1GQ495M9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.33■■□□□ 1.01
USH1GQ495M9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.33■■□□□ 1.01
USH1GQ495M9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.33■■□□□ 1.01
USH1GQ495M9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.33■■□□□ 1.01
USH1GQ495M9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USH1GQ495M9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.33■■□□□ 1
USH1GQ495M9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USH1GQ495M9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.33■■□□□ 1
USH1GQ495M9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.33■■□□□ 1
USH1GQ495M9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.33■■□□□ 1
USH1GQ495M9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USH1GQ495M9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
USH1GQ495M9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
USH1GQ495M9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.32■■□□□ 1
USH1GQ495M9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.32■■□□□ 1
USH1GQ495M9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.32■■□□□ 1
USH1GQ495M9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.32■■□□□ 1
USH1GQ495M9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.32■■□□□ 1
USH1GQ495M9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.32■■□□□ 1
USH1GQ495M9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.32■■□□□ 1
USH1GQ495M9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.32■■□□□ 1
USH1GQ495M9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
USH1GQ495M9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.32■■□□□ 1
USH1GQ495M9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.31■■□□□ 1
USH1GQ495M9 KRT8P50-201ENST00000562022 1438 ntBASIC21.31■■□□□ 1
USH1GQ495M9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
USH1GQ495M9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms