Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 CRCP-205ENST00000431089 942 ntTSL 2 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
HMGXB3Q12766 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
HMGXB3Q12766 METTL21AP1-201ENST00000438852 635 ntBASIC32.68■■■□□ 2.82
HMGXB3Q12766 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC32.68■■■□□ 2.82
HMGXB3Q12766 MIR3687-2-201ENST00000577708 61 ntBASIC32.68■■■□□ 2.82
HMGXB3Q12766 RPS15-207ENST00000591032 550 ntTSL 3 BASIC32.68■■■□□ 2.82
HMGXB3Q12766 MIR3687-1-201ENST00000614492 61 ntBASIC32.68■■■□□ 2.82
HMGXB3Q12766 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
HMGXB3Q12766 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
HMGXB3Q12766 MED17-221ENST00000639724 2317 ntTSL 5 BASIC32.68■■■□□ 2.82
HMGXB3Q12766 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 AC107918.4-202ENST00000641623 219 ntBASIC32.67■■■□□ 2.82
HMGXB3Q12766 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 AC007967.2-201ENST00000432613 625 ntBASIC32.67■■■□□ 2.82
HMGXB3Q12766 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 YBX1P5-201ENST00000509441 847 ntBASIC32.67■■■□□ 2.82
HMGXB3Q12766 UNC93B6-202ENST00000528242 690 ntBASIC32.67■■■□□ 2.82
HMGXB3Q12766 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
HMGXB3Q12766 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC32.67■■■□□ 2.82
HMGXB3Q12766 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
HMGXB3Q12766 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC32.66■■■□□ 2.82
HMGXB3Q12766 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC32.66■■■□□ 2.82
HMGXB3Q12766 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC32.66■■■□□ 2.82
HMGXB3Q12766 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC32.66■■■□□ 2.82
HMGXB3Q12766 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC32.65■■■□□ 2.82
HMGXB3Q12766 AL391422.3-201ENST00000603791 2761 ntBASIC32.65■■■□□ 2.82
HMGXB3Q12766 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC32.65■■■□□ 2.82
HMGXB3Q12766 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC32.65■■■□□ 2.82
HMGXB3Q12766 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC32.65■■■□□ 2.82
HMGXB3Q12766 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
HMGXB3Q12766 AL356309.3-201ENST00000624132 1934 ntBASIC32.64■■■□□ 2.82
HMGXB3Q12766 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
HMGXB3Q12766 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
HMGXB3Q12766 LBH-203ENST00000404397 543 ntTSL 4 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
HMGXB3Q12766 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
HMGXB3Q12766 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
HMGXB3Q12766 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 COPE-211ENST00000600932 1144 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
HMGXB3Q12766 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
HMGXB3Q12766 AP002414.3-201ENST00000589352 1468 ntBASIC32.63■■■□□ 2.81
HMGXB3Q12766 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
HMGXB3Q12766 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC32.63■■■□□ 2.81
HMGXB3Q12766 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
HMGXB3Q12766 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
HMGXB3Q12766 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 ALG1L5P-201ENST00000482043 771 ntBASIC32.62■■■□□ 2.81
HMGXB3Q12766 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
HMGXB3Q12766 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
HMGXB3Q12766 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
HMGXB3Q12766 NARF-204ENST00000390006 1766 ntTSL 2 BASIC32.62■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms