Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 PRORSD1P-201ENST00000295112 541 ntBASIC12.33□□□□□ -0.44
SYCNQ0VAF6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 B3GAT3P1-201ENST00000471720 806 ntBASIC12.33□□□□□ -0.44
SYCNQ0VAF6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 MYC-208ENST00000641036 567 ntBASIC12.33□□□□□ -0.44
SYCNQ0VAF6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 NFIC-211ENST00000641145 8399 ntBASIC12.33□□□□□ -0.44
SYCNQ0VAF6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SYCNQ0VAF6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AC011506.1-201ENST00000474329 610 ntBASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 AC090164.3-201ENST00000610780 2143 ntBASIC12.32□□□□□ -0.44
SYCNQ0VAF6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SYCNQ0VAF6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 GCSHP5-201ENST00000443090 522 ntBASIC12.31□□□□□ -0.44
SYCNQ0VAF6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms