Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FSCN1P1-201ENST00000568912 1481 ntBASIC17.96■□□□□ 0.47
HMGCS1Q01581 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 AP000692.2-201ENST00000608391 879 ntBASIC17.96■□□□□ 0.47
HMGCS1Q01581 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCS1Q01581 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCS1Q01581 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.96■□□□□ 0.46
HMGCS1Q01581 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 AL135905.2-201ENST00000584934 1404 ntBASIC17.95■□□□□ 0.46
HMGCS1Q01581 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HMGCS1Q01581 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCS1Q01581 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.94■□□□□ 0.46
HMGCS1Q01581 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 ABALON-201ENST00000629058 1903 ntBASIC17.94■□□□□ 0.46
HMGCS1Q01581 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 AC008622.2-201ENST00000617006 1229 ntBASIC17.94■□□□□ 0.46
HMGCS1Q01581 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCS1Q01581 NOC2LP1-202ENST00000452600 2235 ntBASIC17.94■□□□□ 0.46
HMGCS1Q01581 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGCS1Q01581 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 AC008556.1-201ENST00000610908 2040 ntBASIC17.93■□□□□ 0.46
HMGCS1Q01581 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCS1Q01581 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 AC026471.1-201ENST00000564629 3026 ntBASIC17.93■□□□□ 0.46
HMGCS1Q01581 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGCS1Q01581 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms