Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
ACTA1P68133 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACTA1P68133 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ACTA1P68133 PKD1P1-201ENST00000458669 6805 ntBASIC16.62■□□□□ 0.25
ACTA1P68133 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ACTA1P68133 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.61■□□□□ 0.25
ACTA1P68133 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.61■□□□□ 0.25
ACTA1P68133 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
ACTA1P68133 HLA-L-209ENST00000420110 1011 ntBASIC16.61■□□□□ 0.25
ACTA1P68133 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.61■□□□□ 0.25
ACTA1P68133 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.61■□□□□ 0.25
ACTA1P68133 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
ACTA1P68133 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.61■□□□□ 0.25
ACTA1P68133 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 ESPNP-201ENST00000270691 2015 ntBASIC16.61■□□□□ 0.25
ACTA1P68133 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.61■□□□□ 0.25
ACTA1P68133 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.61■□□□□ 0.25
ACTA1P68133 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ACTA1P68133 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
ACTA1P68133 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 ID1-201ENST00000376105 1233 ntBASIC16.6■□□□□ 0.25
ACTA1P68133 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.6■□□□□ 0.25
ACTA1P68133 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.6■□□□□ 0.25
ACTA1P68133 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 Z85996.1-201ENST00000494644 937 ntBASIC16.6■□□□□ 0.25
ACTA1P68133 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ACTA1P68133 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ACTA1P68133 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.6■□□□□ 0.25
ACTA1P68133 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
ACTA1P68133 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ACTA1P68133 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.59■□□□□ 0.25
ACTA1P68133 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ACTA1P68133 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.59■□□□□ 0.25
ACTA1P68133 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ACTA1P68133 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.59■□□□□ 0.25
ACTA1P68133 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ACTA1P68133 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.59■□□□□ 0.25
ACTA1P68133 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ACTA1P68133 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ACTA1P68133 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ACTA1P68133 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
ACTA1P68133 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ACTA1P68133 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.58■□□□□ 0.25
ACTA1P68133 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
ACTA1P68133 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ACTA1P68133 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.58■□□□□ 0.24
ACTA1P68133 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ACTA1P68133 AL355802.2-201ENST00000402069 882 ntBASIC16.58■□□□□ 0.24
ACTA1P68133 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ACTA1P68133 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ACTA1P68133 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ACTA1P68133 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.58■□□□□ 0.24
ACTA1P68133 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ACTA1P68133 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms