Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
RPS4XP62701 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 KRT8P9-201ENST00000558927 1449 ntBASIC16.82■□□□□ 0.28
RPS4XP62701 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 KRT18P22-201ENST00000402024 1347 ntBASIC16.82■□□□□ 0.28
RPS4XP62701 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.82■□□□□ 0.28
RPS4XP62701 KRT18P41-201ENST00000518924 1277 ntBASIC16.82■□□□□ 0.28
RPS4XP62701 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.82■□□□□ 0.28
RPS4XP62701 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 FITM1-202ENST00000559294 800 ntBASIC16.82■□□□□ 0.28
RPS4XP62701 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS4XP62701 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS4XP62701 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS4XP62701 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4XP62701 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4XP62701 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4XP62701 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 ABALON-201ENST00000629058 1903 ntBASIC16.81■□□□□ 0.28
RPS4XP62701 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.81■□□□□ 0.28
RPS4XP62701 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.81■□□□□ 0.28
RPS4XP62701 AL049597.2-201ENST00000565575 961 ntBASIC16.81■□□□□ 0.28
RPS4XP62701 AL590326.2-201ENST00000625139 305 ntBASIC16.81■□□□□ 0.28
RPS4XP62701 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS4XP62701 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS4XP62701 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.8■□□□□ 0.28
RPS4XP62701 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 NOC2LP1-202ENST00000452600 2235 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 AC113347.1-201ENST00000413321 391 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.8■□□□□ 0.28
RPS4XP62701 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.8■□□□□ 0.28
RPS4XP62701 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RPS4XP62701 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 AL445228.2-201ENST00000605589 952 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 AC008622.2-201ENST00000617006 1229 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.8■□□□□ 0.28
RPS4XP62701 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPS4XP62701 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS4XP62701 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms