Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRPFP62306 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRPFP62306 AL162741.1-201ENST00000565563 1558 ntBASIC20.22■□□□□ 0.83
SNRPFP62306 AC073508.3-201ENST00000619697 1419 ntBASIC20.22■□□□□ 0.83
SNRPFP62306 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.22■□□□□ 0.83
SNRPFP62306 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.22■□□□□ 0.83
SNRPFP62306 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SNRPFP62306 AL137013.1-201ENST00000432946 1228 ntBASIC20.22■□□□□ 0.83
SNRPFP62306 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRPFP62306 ATP5G1P1-201ENST00000448724 379 ntBASIC20.22■□□□□ 0.83
SNRPFP62306 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRPFP62306 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.22■□□□□ 0.83
SNRPFP62306 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRPFP62306 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.22■□□□□ 0.83
SNRPFP62306 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.22■□□□□ 0.83
SNRPFP62306 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.22■□□□□ 0.83
SNRPFP62306 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SNRPFP62306 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRPFP62306 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPFP62306 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.21■□□□□ 0.83
SNRPFP62306 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.21■□□□□ 0.83
SNRPFP62306 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 TERF1P1-201ENST00000311003 1181 ntBASIC20.21■□□□□ 0.83
SNRPFP62306 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.21■□□□□ 0.83
SNRPFP62306 BX664615.1-201ENST00000443558 458 ntBASIC20.21■□□□□ 0.83
SNRPFP62306 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRPFP62306 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SNRPFP62306 AC010203.1-204ENST00000548782 407 ntBASIC20.21■□□□□ 0.83
SNRPFP62306 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRPFP62306 AC010240.3-201ENST00000607688 395 ntBASIC20.21■□□□□ 0.83
SNRPFP62306 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SNRPFP62306 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPFP62306 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPFP62306 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SNRPFP62306 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNRPFP62306 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.2■□□□□ 0.82
SNRPFP62306 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRPFP62306 AC009102.3-201ENST00000623118 1491 ntBASIC20.2■□□□□ 0.82
SNRPFP62306 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRPFP62306 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.2■□□□□ 0.82
SNRPFP62306 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SNRPFP62306 AC092865.7-201ENST00000641832 219 ntBASIC20.2■□□□□ 0.82
SNRPFP62306 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRPFP62306 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPFP62306 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRPFP62306 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNRPFP62306 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SNRPFP62306 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNRPFP62306 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRPFP62306 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms