Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 TSPY15P-201ENST00000457163 923 ntBASIC18.12■□□□□ 0.49
AP1S2P56377 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S2P56377 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S2P56377 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.12■□□□□ 0.49
AP1S2P56377 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
AP1S2P56377 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 KRT8P7-201ENST00000533003 1432 ntBASIC18.12■□□□□ 0.49
AP1S2P56377 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 MYLKP1-201ENST00000509077 1580 ntBASIC18.12■□□□□ 0.49
AP1S2P56377 AC036111.1-201ENST00000533973 1582 ntBASIC18.12■□□□□ 0.49
AP1S2P56377 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.12■□□□□ 0.49
AP1S2P56377 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP1S2P56377 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP1S2P56377 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.11■□□□□ 0.49
AP1S2P56377 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S2P56377 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
AP1S2P56377 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP1S2P56377 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S2P56377 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
AP1S2P56377 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
AP1S2P56377 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP1S2P56377 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
AP1S2P56377 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.1■□□□□ 0.49
AP1S2P56377 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 CYP2D8P-201ENST00000433633 1490 ntBASIC18.1■□□□□ 0.49
AP1S2P56377 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.1■□□□□ 0.49
AP1S2P56377 HOXB1-202ENST00000577092 1414 ntBASIC18.1■□□□□ 0.49
AP1S2P56377 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.1■□□□□ 0.49
AP1S2P56377 CR769767.2-201ENST00000622735 460 ntBASIC18.1■□□□□ 0.49
AP1S2P56377 AC010947.1-201ENST00000623454 693 ntBASIC18.1■□□□□ 0.49
AP1S2P56377 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.1■□□□□ 0.49
AP1S2P56377 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S2P56377 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S2P56377 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S2P56377 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
AP1S2P56377 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
AP1S2P56377 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S2P56377 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.09■□□□□ 0.49
AP1S2P56377 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S2P56377 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S2P56377 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 AL512604.3-201ENST00000569583 964 ntBASIC18.09■□□□□ 0.49
AP1S2P56377 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP1S2P56377 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
AP1S2P56377 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S2P56377 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 AC104581.1-202ENST00000635932 2618 ntBASIC18.09■□□□□ 0.49
AP1S2P56377 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
AP1S2P56377 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S2P56377 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
AP1S2P56377 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.08■□□□□ 0.49
AP1S2P56377 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.08■□□□□ 0.49
AP1S2P56377 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S2P56377 KRT8P9-201ENST00000558927 1449 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms