Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF144AP50876 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF144AP50876 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF144AP50876 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF144AP50876 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 MIR1238-201ENST00000408483 83 ntBASIC17.31■□□□□ 0.36
RNF144AP50876 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF144AP50876 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF144AP50876 MIR4785-201ENST00000585005 73 ntBASIC17.31■□□□□ 0.36
RNF144AP50876 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF144AP50876 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF144AP50876 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 AC018470.1-201ENST00000624790 3129 ntBASIC17.31■□□□□ 0.36
RNF144AP50876 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF144AP50876 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF144AP50876 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF144AP50876 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF144AP50876 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF144AP50876 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
RNF144AP50876 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF144AP50876 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF144AP50876 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF144AP50876 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF144AP50876 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 MTMR9LP-203ENST00000426597 1545 ntBASIC17.3■□□□□ 0.36
RNF144AP50876 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
RNF144AP50876 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF144AP50876 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF144AP50876 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF144AP50876 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF144AP50876 HEIH-201ENST00000623091 1652 ntBASIC17.29■□□□□ 0.36
RNF144AP50876 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF144AP50876 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF144AP50876 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF144AP50876 MIR4497-201ENST00000583208 89 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms