Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 HLA-F-220ENST00000434407 884 ntBASIC19.71■□□□□ 0.75
LHX1P48742 VENTXP5-201ENST00000523979 775 ntBASIC19.71■□□□□ 0.75
LHX1P48742 AL136038.4-201ENST00000603606 1261 ntBASIC19.71■□□□□ 0.75
LHX1P48742 AC079602.3-201ENST00000623931 403 ntBASIC19.71■□□□□ 0.75
LHX1P48742 AP000550.4-202ENST00000639755 178 ntBASIC19.71■□□□□ 0.75
LHX1P48742 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 AC005332.1-201ENST00000577698 1310 ntBASIC19.71■□□□□ 0.75
LHX1P48742 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.71■□□□□ 0.75
LHX1P48742 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX1P48742 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX1P48742 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LHX1P48742 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.7■□□□□ 0.74
LHX1P48742 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LHX1P48742 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX1P48742 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX1P48742 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX1P48742 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LHX1P48742 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX1P48742 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 AL391807.1-203ENST00000604392 2365 ntBASIC19.7■□□□□ 0.74
LHX1P48742 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX1P48742 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LHX1P48742 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LHX1P48742 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LHX1P48742 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LHX1P48742 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LHX1P48742 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LHX1P48742 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX1P48742 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 PVRIG2P-201ENST00000435460 978 ntBASIC19.69■□□□□ 0.74
LHX1P48742 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX1P48742 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX1P48742 AL163051.1-201ENST00000569214 1512 ntBASIC19.69■□□□□ 0.74
LHX1P48742 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX1P48742 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX1P48742 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX1P48742 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX1P48742 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX1P48742 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX1P48742 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 SPDYE13P-201ENST00000445314 798 ntBASIC19.68■□□□□ 0.74
LHX1P48742 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.68■□□□□ 0.74
LHX1P48742 AC116407.4-201ENST00000623319 1061 ntBASIC19.68■□□□□ 0.74
LHX1P48742 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LHX1P48742 AC093525.10-201ENST00000625130 1569 ntBASIC19.68■□□□□ 0.74
LHX1P48742 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX1P48742 IER3-202ENST00000376377 1350 ntBASIC19.68■□□□□ 0.74
LHX1P48742 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LHX1P48742 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
LHX1P48742 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX1P48742 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.67■□□□□ 0.74
LHX1P48742 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX1P48742 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.67■□□□□ 0.74
LHX1P48742 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.67■□□□□ 0.74
LHX1P48742 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LHX1P48742 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX1P48742 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LHX1P48742 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX1P48742 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms