Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.26■□□□□ 0.03
NKX2-1P43699 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NKX2-1P43699 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NKX2-1P43699 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NKX2-1P43699 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX2-1P43699 MIR935-201ENST00000401179 91 ntBASIC15.25■□□□□ 0.03
NKX2-1P43699 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
NKX2-1P43699 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX2-1P43699 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.25■□□□□ 0.03
NKX2-1P43699 AC006557.6-201ENST00000623071 864 ntBASIC15.25■□□□□ 0.03
NKX2-1P43699 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NKX2-1P43699 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NKX2-1P43699 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.25■□□□□ 0.03
NKX2-1P43699 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 AC106820.2-201ENST00000563775 3264 ntBASIC15.25■□□□□ 0.03
NKX2-1P43699 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NKX2-1P43699 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 AC138028.4-201ENST00000564984 1845 ntBASIC15.24■□□□□ 0.03
NKX2-1P43699 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 AL499627.1-201ENST00000569373 2188 ntBASIC15.24■□□□□ 0.03
NKX2-1P43699 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX2-1P43699 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
NKX2-1P43699 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.24■□□□□ 0.03
NKX2-1P43699 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX2-1P43699 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.24■□□□□ 0.03
NKX2-1P43699 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NKX2-1P43699 AC022517.1-201ENST00000592429 346 ntBASIC15.24■□□□□ 0.03
NKX2-1P43699 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NKX2-1P43699 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
NKX2-1P43699 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NKX2-1P43699 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NKX2-1P43699 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.24■□□□□ 0.03
NKX2-1P43699 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX2-1P43699 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.23■□□□□ 0.03
NKX2-1P43699 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.23■□□□□ 0.03
NKX2-1P43699 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.23■□□□□ 0.03
NKX2-1P43699 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NKX2-1P43699 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.23■□□□□ 0.03
NKX2-1P43699 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NKX2-1P43699 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX2-1P43699 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.23■□□□□ 0.03
NKX2-1P43699 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NKX2-1P43699 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.23■□□□□ 0.03
NKX2-1P43699 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.23■□□□□ 0.03
NKX2-1P43699 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms