Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRNA4P43681 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRNA4P43681 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHRNA4P43681 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRNA4P43681 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRNA4P43681 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRNA4P43681 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHRNA4P43681 LINC01568-207ENST00000641790 1380 ntBASIC18.78■□□□□ 0.6
CHRNA4P43681 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRNA4P43681 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CHRNA4P43681 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CHRNA4P43681 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA4P43681 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHRNA4P43681 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRNA4P43681 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRNA4P43681 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHRNA4P43681 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
CHRNA4P43681 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CHRNA4P43681 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRNA4P43681 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA4P43681 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA4P43681 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA4P43681 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CHRNA4P43681 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA4P43681 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHRNA4P43681 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRNA4P43681 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA4P43681 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHRNA4P43681 AC010653.2-201ENST00000623505 997 ntBASIC18.76■□□□□ 0.59
CHRNA4P43681 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
CHRNA4P43681 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA4P43681 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHRNA4P43681 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRNA4P43681 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA4P43681 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA4P43681 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRNA4P43681 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHRNA4P43681 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA4P43681 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHRNA4P43681 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA4P43681 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 AC128688.1-201ENST00000487626 519 ntBASIC18.75■□□□□ 0.59
CHRNA4P43681 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA4P43681 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA4P43681 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CHRNA4P43681 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
CHRNA4P43681 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
CHRNA4P43681 AC073592.3-201ENST00000625118 1834 ntBASIC18.74■□□□□ 0.59
CHRNA4P43681 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRNA4P43681 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRNA4P43681 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHRNA4P43681 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.74■□□□□ 0.59
CHRNA4P43681 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA4P43681 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRNA4P43681 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CHRNA4P43681 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRNA4P43681 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA4P43681 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA4P43681 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA4P43681 AC034236.2-201ENST00000606662 1610 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms