Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT20P35900 TSPY21P-201ENST00000433481 731 ntBASIC17.71■□□□□ 0.43
KRT20P35900 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT20P35900 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KRT20P35900 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
KRT20P35900 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 AC026471.5-201ENST00000615068 467 ntBASIC17.71■□□□□ 0.43
KRT20P35900 MIR6786-201ENST00000616843 113 ntBASIC17.71■□□□□ 0.43
KRT20P35900 AC011298.2-201ENST00000617989 482 ntBASIC17.71■□□□□ 0.43
KRT20P35900 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 BICD1-207ENST00000551848 1962 ntBASIC17.71■□□□□ 0.43
KRT20P35900 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT20P35900 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT20P35900 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT20P35900 KRT17P2-201ENST00000300992 1314 ntBASIC17.71■□□□□ 0.42
KRT20P35900 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
KRT20P35900 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT20P35900 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.71■□□□□ 0.42
KRT20P35900 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.71■□□□□ 0.42
KRT20P35900 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT20P35900 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KRT20P35900 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
KRT20P35900 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT20P35900 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
KRT20P35900 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
KRT20P35900 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 NOC2LP1-202ENST00000452600 2235 ntBASIC17.7■□□□□ 0.42
KRT20P35900 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT20P35900 Z85996.1-201ENST00000494644 937 ntBASIC17.7■□□□□ 0.42
KRT20P35900 NUDT16P1-203ENST00000513809 620 ntBASIC17.7■□□□□ 0.42
KRT20P35900 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT20P35900 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT20P35900 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.7■□□□□ 0.42
KRT20P35900 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KRT20P35900 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT20P35900 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 RCC2P6-201ENST00000526625 1557 ntBASIC17.7■□□□□ 0.42
KRT20P35900 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT20P35900 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT20P35900 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT20P35900 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
KRT20P35900 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 SNORA78-201ENST00000459373 127 ntBASIC17.69■□□□□ 0.42
KRT20P35900 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT20P35900 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 AC066615.1-201ENST00000640911 628 ntBASIC17.69■□□□□ 0.42
KRT20P35900 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 FP475955.4-201ENST00000623131 1990 ntBASIC17.69■□□□□ 0.42
KRT20P35900 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT20P35900 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT20P35900 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT20P35900 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms