Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 ABHD17AP1-201ENST00000358206 933 ntBASIC20.38■□□□□ 0.85
KRT9P35527 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.38■□□□□ 0.85
KRT9P35527 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT9P35527 RPS2P4-201ENST00000476944 856 ntBASIC20.38■□□□□ 0.85
KRT9P35527 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.38■□□□□ 0.85
KRT9P35527 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT9P35527 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.38■□□□□ 0.85
KRT9P35527 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 AF186192.3-201ENST00000583427 947 ntBASIC20.38■□□□□ 0.85
KRT9P35527 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT9P35527 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT9P35527 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT9P35527 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
KRT9P35527 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT9P35527 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 AC098590.1-201ENST00000468126 897 ntBASIC20.37■□□□□ 0.85
KRT9P35527 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.37■□□□□ 0.85
KRT9P35527 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.37■□□□□ 0.85
KRT9P35527 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT9P35527 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT9P35527 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT9P35527 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
KRT9P35527 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT9P35527 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
KRT9P35527 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
KRT9P35527 GCSHP5-201ENST00000443090 522 ntBASIC20.36■□□□□ 0.85
KRT9P35527 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT9P35527 Z85996.1-201ENST00000494644 937 ntBASIC20.36■□□□□ 0.85
KRT9P35527 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT9P35527 CR392000.1-201ENST00000624770 1228 ntBASIC20.36■□□□□ 0.85
KRT9P35527 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KRT9P35527 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 LTB4R2-202ENST00000528054 3092 ntBASIC20.36■□□□□ 0.85
KRT9P35527 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT9P35527 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KRT9P35527 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT9P35527 KRT16P1-201ENST00000399124 1418 ntBASIC20.36■□□□□ 0.85
KRT9P35527 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT9P35527 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 AC004980.1-204ENST00000429707 299 ntBASIC20.35■□□□□ 0.85
KRT9P35527 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT9P35527 UBE2SP1-201ENST00000450587 669 ntBASIC20.35■□□□□ 0.85
KRT9P35527 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT9P35527 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms