Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RFC1P35251 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 KRT8P9-201ENST00000558927 1449 ntBASIC19.62■□□□□ 0.73
RFC1P35251 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 SLC25A1P2-201ENST00000430693 912 ntBASIC19.62■□□□□ 0.73
RFC1P35251 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC1P35251 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.62■□□□□ 0.73
RFC1P35251 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.62■□□□□ 0.73
RFC1P35251 AC090164.3-201ENST00000610780 2143 ntBASIC19.62■□□□□ 0.73
RFC1P35251 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC1P35251 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RFC1P35251 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.62■□□□□ 0.73
RFC1P35251 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC1P35251 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.61■□□□□ 0.73
RFC1P35251 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 AL353719.1-201ENST00000566847 864 ntBASIC19.61■□□□□ 0.73
RFC1P35251 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.61■□□□□ 0.73
RFC1P35251 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC1P35251 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFC1P35251 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RFC1P35251 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFC1P35251 CYP2D8P-201ENST00000433633 1490 ntBASIC19.6■□□□□ 0.73
RFC1P35251 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFC1P35251 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 MCCD1P1-208ENST00000445732 328 ntBASIC19.6■□□□□ 0.73
RFC1P35251 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
RFC1P35251 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.6■□□□□ 0.73
RFC1P35251 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC1P35251 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFC1P35251 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RFC1P35251 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
RFC1P35251 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.6■□□□□ 0.73
RFC1P35251 AC092338.2-201ENST00000568827 1415 ntBASIC19.59■□□□□ 0.73
RFC1P35251 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFC1P35251 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
RFC1P35251 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms